{ "cells": [ { "cell_type": "markdown", "id": "markdown-000", "metadata": {}, "source": [ "# Numerical energy conservation\n", "\n", "[Read the lesson](https://tirta.co/a-byte-of-physics/numerical-energy-conservation). This notebook includes the lesson text and its Python examples in reading order. Run the setup cell, then run the remaining cells from top to bottom. In Colab, use File → Save a copy in Drive to keep your edits. You can run and edit this view without changing the course source. Examples use illustrative data unless stated otherwise." ] }, { "cell_type": "code", "id": "code-001", "metadata": {}, "source": [ "import importlib.metadata\n", "import subprocess\n", "import sys\n", "\n", "requirements = {\"numpy\": (2, 0), \"sympy\": (1, 13), \"matplotlib\": (3, 8)}\n", "to_install = []\n", "for package, minimum in requirements.items():\n", " try:\n", " installed = importlib.metadata.version(package)\n", " version = tuple(int(part) for part in installed.split(\".\")[:2])\n", " except importlib.metadata.PackageNotFoundError:\n", " version = (0, 0)\n", " if version < minimum:\n", " to_install.append(f\"{package}>={minimum[0]}.{minimum[1]}\")\n", "if to_install:\n", " subprocess.check_call([sys.executable, \"-m\", \"pip\", \"install\", *to_install])\n", "\n", "import numpy as np\n", "import sympy as sp\n", "import matplotlib\n", "import matplotlib.pyplot as plt\n", "\n", "print(\"Python\", sys.version.split()[0])\n", "print(\"NumPy\", np.__version__)\n", "print(\"SymPy\", sp.__version__)\n", "print(\"Matplotlib\", matplotlib.__version__)\n" ], "execution_count": null, "outputs": [] }, { "cell_type": "markdown", "id": "markdown-002", "metadata": {}, "source": [ "Energy is one of the strongest diagnostics for a trajectory calculation, but “energy\n", "should be constant” is true only for a correctly chosen closed, time-independent model.\n", "A useful numerical check first defines the system, names every included energy store and\n", "boundary transfer, and then measures the unexplained residual at compatible times.\n", "\n", "## Define what is conserved\n", "\n", "For one particle moving in a time-independent conservative potential,\n", "\n", "\n", "$$\n", "E=K+U=\\frac12m|\\mathbf v|^2+U(\\mathbf r)\n", "$$\n", "\n", "\n", "and the continuous equations imply\n", "$dE/dt=0$.\n", "Kinetic and potential energy can change substantially while their sum remains constant.\n", "\n", "For several interacting particles, include every particle's kinetic energy and count\n", "each pair potential once:\n", "\n", "\n", "$$\n", "E=\\sum_i\\frac12m_i|\\mathbf v_i|^2+\\sum_{i {output_value:.6g} J\")\n", "assert np.all(np.isfinite(outputs))\n" ], "execution_count": null, "outputs": [] }, { "cell_type": "markdown", "id": "markdown-012", "metadata": {}, "source": [ "`lambdify` turns the symbolic expression into a numerical function. We explicitly select\n", "NumPy as its numerical backend so it can accept an array. The same expression now has\n", "two useful forms: one for algebra and one for calculating many cases. The assertion\n", "checks that the chosen inputs produce finite outputs. It would catch an infinity or an\n", "undefined numerical result, but a finite value can still be physically inappropriate.\n", "\n", "### Make a graph that answers the question\n", "\n", "The horizontal axis shows position; the vertical axis shows spring potential energy. Every plotted\n", "point is a prediction of the same expression. We mark the reference case separately\n", "so that a reader can connect the earlier printed value to its place on the curve.\n", "The axis labels include units because a shape without a scale cannot tell us the size\n", "of a physical effect." ] }, { "cell_type": "code", "id": "code-013", "metadata": {}, "source": [ "input_grid = np.linspace(-2.0, 2.0, 301)\n", "output_grid = np.asarray(evaluate(input_grid), dtype=float)\n", "output_grid = np.broadcast_to(output_grid, input_grid.shape)\n", "fig, ax = plt.subplots(figsize=(7, 4))\n", "ax.plot(input_grid, output_grid, label=\"Stated model\")\n", "ax.scatter([reference_input], [reference_output], label=\"Reference case\", zorder=3)\n", "ax.set_xlabel(\"Position (m)\")\n", "ax.set_ylabel(\"Spring potential energy (J)\")\n", "ax.legend()\n", "ax.grid(alpha=0.25)\n", "fig.tight_layout()\n", "plt.show()\n" ], "execution_count": null, "outputs": [] }, { "cell_type": "markdown", "id": "markdown-014", "metadata": {}, "source": [ "Look for a sign change, a turning point, or a region where the curve becomes steep.\n", "Connect each feature to the expression rather than to the colour of the line. If the\n", "curve has a minimum or maximum, changing the input in opposite directions may have\n", "similar effects on the output near that point. If it is nearly straight over a short\n", "interval, a local linear approximation may be useful even when the complete expression\n", "is nonlinear.\n", "\n", "Increasing the number of samples makes the line smoother and may reveal features that\n", "a coarse grid missed. It does not improve the physical inputs or enlarge the model's\n", "validity range. For quantities that can take only discrete values, use the line as a\n", "guide to the relationship and interpret only the allowed input values. A plotting\n", "function does not enforce such restrictions for you.\n", "\n", "### Measure the local sensitivity\n", "\n", "A derivative asks a more specific question than the whole graph: how quickly does\n", "spring potential energy change near the reference input? Its units are the output unit divided by\n", "the input unit. For this calculation, the derivative at 1 m is\n", "1 in those ratio units. Locally, the output increases as the\n", "input increases. This statement is local; the sign or size of the slope can be different\n", "elsewhere on the curve.\n", "\n", "\n", "$$\n", "f'(q) = q\n", "$$\n", "\n", "\n", "For a small input change, multiply the derivative by that change to estimate the output\n", "change. Then compare that estimate with a fresh evaluation of the full expression.\n", "The distinction between these two calculations matters: the derivative gives a tangent\n", "approximation, while substitution evaluates the chosen expression at the new point." ] }, { "cell_type": "code", "id": "code-015", "metadata": {}, "source": [ "slope_expression = sp.diff(expression, q)\n", "slope_at_reference = float(slope_expression.subs(q, reference_input))\n", "changed_input = 1.02\n", "linear_prediction = reference_output + slope_at_reference * (\n", " changed_input - reference_input\n", ")\n", "full_prediction = float(evaluate(changed_input))\n", "print(\"Symbolic derivative:\", slope_expression)\n", "print(\"Tangent prediction:\", linear_prediction, \"J\")\n", "print(\"Full expression:\", full_prediction, \"J\")\n", "print(\"Approximation difference:\", full_prediction - linear_prediction, \"J\")\n" ], "execution_count": null, "outputs": [] }, { "cell_type": "markdown", "id": "markdown-016", "metadata": {}, "source": [ "Here the changed input is 1.02 m. The tangent estimate is\n", "0.52 J, while the full expression gives\n", "0.5202 J. If the two values are close, it means the chosen\n", "input change is small enough for this local approximation at this point. It does not\n", "mean the entire model is linear. If the slope is zero, a quadratic or higher-order term\n", "may supply the leading change instead.\n", "\n", "This is also the beginning of uncertainty propagation. If the input has a small stated\n", "standard uncertainty, the magnitude of the slope times that uncertainty estimates one\n", "contribution to output uncertainty. Do not automatically use the same rule for a wide\n", "interval, a discontinuity, a turning point with zero first derivative, or several\n", "correlated uncertain inputs. Those situations need more of the model than one slope.\n", "\n", "### Check the derivative with numerical differences\n", "\n", "We can estimate the same slope from values on either side of the reference point.\n", "Subtract the lower output from the upper output and divide by twice the input step.\n", "Parentheses are essential: the entire output difference must be divided by the entire\n", "input interval. Without them, Python can execute a different mathematical expression\n", "while still producing a plausible number.\n", "\n", "The calculation below uses three decreasing step sizes. Each estimate is compared with\n", "the symbolic derivative, so the reference is independent of the numerical difference\n", "formula. Near an endpoint, it is acceptable here to evaluate a small extension only\n", "because the displayed mathematical expression is smooth there; such a check does not\n", "assert that extrapolated values describe additional physical cases." ] }, { "cell_type": "code", "id": "code-017", "metadata": {}, "source": [ "input_span = 4.0\n", "for fraction in [1e-2, 1e-3, 1e-4]:\n", " step = input_span * fraction\n", " upper = float(evaluate(reference_input + step))\n", " lower = float(evaluate(reference_input - step))\n", " numerical_slope = (upper - lower) / (2 * step)\n", " difference = numerical_slope - slope_at_reference\n", " print(f\"step={step:.6g}: slope={numerical_slope:.6g}, difference={difference:.6g}\")\n" ], "execution_count": null, "outputs": [] }, { "cell_type": "markdown", "id": "markdown-018", "metadata": {}, "source": [ "For a smooth function, reducing the step often reduces the approximation error at first.\n", "Very small steps can eventually make subtraction of nearly equal floating-point values\n", "less reliable. Therefore “smaller” is not an unlimited guarantee of “better.” Compare\n", "the observed behaviour over a useful range of steps instead of choosing the smallest\n", "number the computer can represent.\n", "\n", "An absolute slope difference is useful when the expected slope is near zero. A relative\n", "difference would divide by a very small reference and could look enormous even when the\n", "absolute discrepancy is tiny. Away from zero, a relative difference can help compare\n", "quantities with very different scales. The tolerance should reflect the question and\n", "the numerical method, rather than a universal decimal threshold copied into every test.\n", "\n", "### Change the example and preserve the reasoning\n", "\n", "Make one copy of the reference calculation before editing it. Choose a second value of\n", "position inside the stated interval, predict whether spring potential energy will rise or fall,\n", "and then evaluate the expression. Place the prediction and the result in a text cell.\n", "If they disagree, identify whether the mistake was in the sign, the unit conversion,\n", "the algebra, or the assumption about how the curve behaves.\n", "\n", "Next choose a shorter plotting interval around the reference point. Compare the local\n", "curve with its tangent approximation. Then widen the interval again. The difference\n", "shows why a useful local estimate need not describe the whole range. Keep the axis\n", "labels and numerical scale visible when comparing the plots; automatic axis limits can\n", "make two different effects appear equally large.\n", "\n", "Finally, return to the physical limit stated at the start: Potential energy varies during motion; conservation applies to the sum of kinetic and potential energy. Describe one change\n", "to the setup that would violate that limit. State what new input, equation, or observation\n", "would be needed before trusting an answer in the changed situation. This last step\n", "connects the Python experiment to the physics instead of treating successful execution\n", "as the only criterion for a useful result.\n", "\n", "Before saving, restart the runtime and run all cells in order. A result that depends on\n", "an earlier, now-deleted input cell is not reproducible from the saved notebook. Keep\n", "unrounded values for later calculations, round only the reported output, and label any\n", "new data as measured, assumed, or generated. The graph and printed values should remain\n", "traceable to the same expression and the same choices of inputs.\n", "\n", "### Recover the output change by integrating the slope\n", "\n", "There is another way to check that the expression and its derivative describe the same\n", "relationship. Add up the small output changes predicted by the slope across the chosen\n", "input interval. In the continuous limit, this integral equals the output at the upper\n", "endpoint minus the output at the lower endpoint. The result has units of J:\n", "the input unit in the integration cancels the input unit in the denominator of the slope.\n", "\n", "This statement is about the mathematics of this particular relationship. It does not\n", "assign a new physical meaning to an arbitrary area under a graph. For example, an area\n", "under force versus distance represents work, while an area under a different pair of\n", "quantities may represent something else or have no standard name. Always carry the\n", "axis units through the calculation before naming an integral." ] }, { "cell_type": "code", "id": "code-019", "metadata": {}, "source": [ "slope_function = sp.lambdify(q, slope_expression, modules=\"numpy\")\n", "endpoint_change = float(evaluate(2.0) - evaluate(-2.0))\n", "for points in [101, 201, 401]:\n", " grid = np.linspace(-2.0, 2.0, points)\n", " slopes = np.asarray(slope_function(grid), dtype=float)\n", " slopes = np.broadcast_to(slopes, grid.shape)\n", " integrated_change = np.trapezoid(slopes, grid)\n", " print(\n", " points,\n", " \"integrated change:\",\n", " integrated_change,\n", " \"endpoint change:\",\n", " endpoint_change,\n", " )\n" ], "execution_count": null, "outputs": [] }, { "cell_type": "markdown", "id": "markdown-020", "metadata": {}, "source": [ "The trapezoidal rule joins neighbouring slope samples with straight segments and adds\n", "their signed areas. A negative contribution remains negative; replacing every slope\n", "by its magnitude would calculate a different quantity. Increasing the sample count\n", "provides a practical refinement check. If the values do not settle toward the endpoint\n", "difference, first inspect the interval, singularities, and array ordering.\n", "\n", "Do not conclude that two agreeing calculations prove the model is physically complete.\n", "Both use the same selected relationship, so an omitted effect would be omitted from\n", "both. Their agreement is evidence that the numerical tools implement that relationship\n", "consistently. Comparing with an independent experiment or a more appropriate physical\n", "model is a separate test.\n", "\n", "Keep this comparison in the notebook when you change the expression. It is particularly\n", "useful after adding a coefficient, changing a sign convention, or converting an input\n", "unit. A code cell that produces a smooth graph can conceal these mistakes; a second\n", "calculation of the same output change gives you another place to notice them.\n", "\n", "## Sources\n", "\n", "- [OpenStax, *University Physics Volume 1*, Section 8.3, \"Conservation of Energy\"](https://openstax.org/books/university-physics-volume-1/pages/8-3-conservation-of-energy).\n", "- [OpenStax, *University Physics Volume 1*, Section 15.2, \"Energy in Simple Harmonic Motion\"](https://openstax.org/books/university-physics-volume-1/pages/15-2-energy-in-simple-harmonic-motion).\n", "- [MIT OpenCourseWare, *8.01SC Classical Mechanics*, Chapter 14, \"Potential Energy and Conservation of Energy\"](https://ocw.mit.edu/courses/8-01sc-classical-mechanics-fall-2016/resources/mit8_01scs22_chapter14/).\n", "- [Physics LibreTexts, \"Numerical Approaches\"](https://phys.libretexts.org/Bookshelves/Classical_Mechanics/Essential_Graduate_Physics_-_Classical_Mechanics_%28Likharev%29/05%3A_Oscillations/5.07%3A_Numerical_Approaches).\n", "- [Benjamin Crowell, *Light and Matter*, Chapter 14, \"Conservation of Energy\"](https://open.umn.edu/opentextbooks/textbooks/light-and-matter)." ] } ], "metadata": { "kernelspec": { "display_name": "Python 3", "language": "python", "name": "python3" }, "language_info": { "name": "python", "version": "3.12" }, "colab": { "name": "numerical-energy-conservation.ipynb", "provenance": [] }, "tirta": { "lesson": "https://tirta.co/a-byte-of-physics/numerical-energy-conservation", "source_sha256": "df4d6e8ad1d7381481896391b992bdc51cff44dd490f198c72044ad1537edbd5" } }, "nbformat": 4, "nbformat_minor": 5 }